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Without regulation the battery set reads 5.15V, and after it, 3.84V
I put the extra 1.2v cell in series, which is what I think you meant.
You have to have an external pullup on the RESET line in order to program the AVR.
What is the schematic for that? I looked for the board on Google as "bloloid" but couldn't find anything... Also, what revision of Avr Studio are you using?Thanks